Commit Graph

18 Commits

Author SHA1 Message Date
Levi Neuwirth f254ce866e Filters: fence/code-span awareness, host matching, nested-header skip
- SourceRefs trigger whitelist aligned to the /source/ serving
  whitelist (drops content/, yaml-source/, broad static//tools//data
  prefixes; adds .bib); existsCached no longer memoizes non-existence,
  so files created under make watch are picked up (§2.5, §2.16)
- fill/stroke hex replacement is boundary-aware: #000080 and 8-digit
  RGBA forms can no longer be corrupted into currentColor80 (§2.12)
- Wikilinks/Transclusion/EmbedPdf skip fenced code blocks (shared
  CommonMark fence tracker), and wikilinks additionally skip inline
  code spans — the syntax-documentation essay now renders its own
  examples literally while live wikilinks still convert (verified both
  ways in output) (§2.13)
- domainIcon matches the extracted host by label suffix instead of
  substring-of-URL; extractHost also strips userinfo (§2.14)
- webpSrc escaped in srcset; internal PDF links no longer double-
  classified; Smallcaps/Archive header-skip now holds at every nesting
  depth via protect/restore walks (§2.17)

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-06-10 11:13:08 -04:00
Levi Neuwirth 8ca22a45d2 Sidenotes: emit the section.footnotes fallback the CSS expects
The filter consumes every Pandoc Note, so the "standard Pandoc-
generated section.footnotes" its doc claimed as the no-JS fallback
never existed — below 1500px with JS disabled, footnote content was
simply invisible (AUDIT §2.3). The filter now collects consumed notes
and appends the section itself: letter labels, jump targets for the
in-text refs (which now point at the visible fallback item), and
doc-backlink returns. sidenotes.js pairs ref/note by element id and
preventDefaults clicks, so behavior with JS is unchanged.

Verified in output: per-page item count matches inline sidenote count;
refs target #fn-<label>; backlinks target #snref-<label>.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-06-10 10:37:28 -04:00
Levi Neuwirth c68d03af31 Fix audit MEDs in feature modules
- Backlinks: handle Plain blocks (tight list items) and DefinitionList
  in link extraction — links in ordinary bullet lists were invisible to
  the backlinks system (AUDIT §3.3)
- Sidenotes: render note bodies with a KaTeX writer so footnote math
  reaches the client-side KaTeX pass instead of degrading to italics
  (§2.4)
- Archive: join manifest to provenance on normalised URLs like every
  other comparison in the system — an equivalent-form URL edit silently
  unpublished the page while links kept pointing at it (§3.6)
- Photography: flat singles get their basename as slug and root-level
  asset paths in map.json (§3.7); geo-precision now fails closed — an
  unrecognised value (typo'd "hidden") suppresses the pin instead of
  publishing rounded coordinates (§3.8)
- Stability: age is measured first-commit -> today, not the commit
  span, so quiet time stabilises a piece as documented (§3.4);
  history: entries are sorted newest-first by date regardless of
  authored order (§3.5); pinned pages format last-reviewed like the
  git branch (§3.10)

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-06-10 09:43:25 -04:00
Levi Neuwirth 77e31efdae Add link archive system: snapshots, backlinks, link-rot
Preserve external works the site cites against link rot, host them at
permanent /archive/<slug>/ URLs in site chrome, and treat them as
first-class citizens of the backlinks and similar-pages indexes.
Curated, not crawled: the author adds one line to archive/manifest.yaml
and the build fetches, hashes, snapshots, and indexes the work.

* archive/manifest.yaml + tools/archive.py (fetch / refresh / wayback /
  check / gc) — PDFs downloaded directly, HTML pages snapshotted with a
  vendored monolith (tools/bin/monolith @ 2.10.1) into a single
  self-contained file with the archive CSP and a noarchive robots meta
  injected. Per-entry PROVENANCE.json committed; gitignored .txt
  sidecars regenerated from the artifact's SHA-256.
* build/Archive.hs + build/ArchiveIndex.hs + build/Filters/Archive.hs
  — Hakyll rules for /archive/ and /archive/<slug>/, a body Pandoc
  filter that appends an archive affordance to live citations and
  flips dead ones to the local copy on archive.py check's asymmetric
  hysteresis (rotted needs 3 fails over >= 14 days; one ok recovers).
* build/Backlinks.hs — keeps archived external URLs through pass 1 and
  canonicalises them to /archive/<slug>/ in pass 2, producing a
  "Referenced by" section grouped by the fragment each citation
  targets. build/Stats.hs gains a "Link archive" telemetry block on
  /build/ (count, total size, median age, by-status / by-quality /
  by-visibility, orphans).
* Integrity: archive.py fetch and build/Archive.hs (via sha256sum)
  both re-hash every committed artifact, so a tampered file halts the
  build even with cabal invoked directly or no .venv present. refresh
  refuses to replace an uncommitted prior snapshot and rolls back
  atomically on any exit path. removed.yaml is honoured by fetch,
  wayback, and check using canonical-form (tracking-stripped,
  arXiv-canonicalised) comparison.
* visibility: private keeps an entry in-repo but undeployed.
  nginx/archive.conf emits X-Robots-Tag: noindex, noarchive for raw
  artifacts that cannot carry meta directives.

The full design, phase plan (1-5), and three refinement passes live
in ARCHIVE.md.

Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
2026-05-23 10:06:33 -04:00
Levi Neuwirth f41311a3eb Inline code reference previews 2026-05-02 10:40:43 -04:00
Levi Neuwirth cd94227acb Spec dilemma 2026-05-01 21:22:01 -04:00
Levi Neuwirth 1a532f881b major visual changes - dingbats, footer, etc 2026-04-17 12:48:22 -04:00
Levi Neuwirth acb3ae7066 visual enhancements 2026-04-15 22:25:38 -04:00
Levi Neuwirth e005380362 subdomain svg correction 2026-04-13 10:26:25 -04:00
Levi Neuwirth 41bbbd799b favicon, logo, internal popups 2026-04-12 14:57:01 -04:00
Levi Neuwirth 1be9c7f3d1 wikilinks fix 2026-04-11 15:45:46 -04:00
Levi Neuwirth a358c8b246 audit: Haskell build system correctness + Patterns.hs + Stats blaze rewrite 2026-04-10 17:41:13 -04:00
Levi Neuwirth 02b7694bfe forgejo links 2026-04-05 11:32:50 -04:00
Levi Neuwirth 9a01c602bc auto: 2026-04-05T01:18:45Z 2026-04-04 21:18:45 -04:00
Levi Neuwirth a5495035be epistemic v2 2026-03-26 09:10:35 -04:00
Levi Neuwirth 728afd4c68 affiliation, cabal helper script 2026-03-26 08:14:50 -04:00
Levi Neuwirth 5cfbfbc0ef GPG signing, embedding pipeline, visualization filter, search timing, sig popups
- GPG page signing: dedicated signing subkey in ~/.gnupg-signing, sign-site.sh
  walks _site/**/*.html producing .sig files, preset-signing-passphrase.sh caches
  passphrase via gpg-preset-passphrase; make sign target; make deploy chains it
- Footer sig link: $url$.sig with hover popup showing ASCII armor (popups.js
  sigContent provider; .footer-sig-link bound explicitly to bypass footer exclusion)
- Public key at static/gpg/pubkey.asc
- Embedding pipeline: tools/embed.py encodes _site pages with nomic-embed-text-v1.5
  + FAISS IndexFlatIP, writes data/similar-links.json; staleness check skips when
  JSON is newer than all HTML; make build invokes via uv, skips gracefully if .venv absent
- SimilarLinks.hs: similarLinksField loads similar-links.json with Hakyll dependency
  tracking; renders Related section in page-footer.html
- uv environment: pyproject.toml + uv.lock (CPU-only torch via pytorch-cpu index)
- Visualization filter: Filters/Viz.hs runs Python scripts for .figure (SVG) and
  .visualization (Vega-Lite JSON) fenced divs; viz.js renders with monochrome config
  and MutationObserver dark-mode re-render; viz.css layout
- Search timing: #search-timing element shows elapsed ms via MutationObserver
- Build telemetry timestamps removed from git tracking (now in .gitignore)
- spec.md updated to v9; WRITING.md updated with viz, related, signing, build docs

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
2026-03-20 20:14:49 -04:00
Levi Neuwirth 714824a0b5 initial deploy! whoop 2026-03-17 21:56:14 -04:00