popup improvements, citation fix
This commit is contained in:
parent
b6b6903bdf
commit
b06b1e741c
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@ -139,14 +139,16 @@ transformInline keyNums (Cite citations _) =
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nums = mapMaybe (`Map.lookup` keyNums) keys
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in if null nums
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then Str ""
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else RawInline "html" (markerHtml (head keys) (head nums) nums)
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else RawInline "html" (markerHtml keys (head keys) (head nums) nums)
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transformInline _ x = x
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markerHtml :: Text -> Int -> [Int] -> Text
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markerHtml firstKey firstNum nums =
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markerHtml :: [Text] -> Text -> Int -> [Int] -> Text
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markerHtml keys firstKey firstNum nums =
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let label = "[" <> T.intercalate "," (map tshow nums) <> "]"
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allIds = T.intercalate " " (map ("ref-" <>) keys)
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in "<sup class=\"cite-marker\" id=\"cite-back-" <> tshow firstNum <> "\">"
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<> "<a href=\"#ref-" <> firstKey <> "\" class=\"cite-link\">"
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<> "<a href=\"#ref-" <> firstKey <> "\" class=\"cite-link\""
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<> " data-cite-keys=\"" <> allIds <> "\">"
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<> label <> "</a></sup>"
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where tshow = T.pack . show
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@ -196,10 +198,10 @@ entryOrder _ _ = maxBound
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-- | Prepend [N] marker to a bibliography entry block.
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addNumber :: Int -> Block -> Block
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addNumber n (Div attrs content) =
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addNumber n (Div attrs@(divId, _, _) content) =
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Div attrs
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( Plain [ RawInline "html"
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("<span class=\"ref-num\">[" <> T.pack (show n) <> "]</span>") ]
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("<a class=\"ref-num\" href=\"#" <> divId <> "\">[" <> T.pack (show n) <> "]</a>") ]
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: content )
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addNumber _ b = b
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@ -49,7 +49,7 @@ constraints: any.Glob ==0.10.2,
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any.conduit ==1.3.6.1,
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any.conduit-extra ==1.3.8,
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any.containers ==0.6.7,
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any.contravariant ==1.5.5,
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any.contravariant ==1.5.6,
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any.cookie ==0.5.0,
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any.crypton ==1.0.4,
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any.crypton-connection ==0.4.5,
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@ -113,7 +113,7 @@ constraints: any.Glob ==0.10.2,
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any.lifted-base ==0.2.3.12,
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any.lrucache ==1.2.0.1,
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any.memory ==0.18.0,
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any.mime-types ==0.1.2.0,
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any.mime-types ==0.1.2.1,
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any.monad-control ==1.0.3.1,
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any.monad-logger ==0.3.42,
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monad-logger +template_haskell,
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@ -142,7 +142,7 @@ constraints: any.Glob ==0.10.2,
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any.prettyprinter-ansi-terminal ==1.1.3,
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any.primitive ==0.9.1.0,
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any.process ==1.6.19.0,
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any.psqueues ==0.2.8.2,
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any.psqueues ==0.2.8.3,
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any.random ==1.2.1.3,
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any.recv ==0.1.1,
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any.regex-base ==0.94.0.3,
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@ -153,7 +153,7 @@ constraints: any.Glob ==0.10.2,
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any.rts ==1.0.2,
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any.safe ==0.3.21,
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any.safe-exceptions ==0.1.7.4,
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any.scientific ==0.3.8.0,
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any.scientific ==0.3.8.1,
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any.semialign ==1.3.1,
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any.semigroupoids ==6.0.2,
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any.serialise ==0.2.6.1,
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@ -215,7 +215,7 @@ constraints: any.Glob ==0.10.2,
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any.unordered-containers ==0.2.20.1,
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any.utf8-string ==1.0.2,
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any.uuid-types ==1.0.6,
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any.vault ==0.3.1.5,
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any.vault ==0.3.1.6,
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any.vector ==0.13.2.0,
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any.vector-algorithms ==0.9.1.0,
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any.vector-stream ==0.1.0.1,
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@ -197,3 +197,285 @@
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year = {2022},
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publisher = {University of Chicago Press}
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}
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% ── ICD Embeddings Preprint ─────────────────────────────────────────────────
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@misc{cms_hrrp,
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author = {{Centers for Medicare \& Medicaid Services}},
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title = {Hospital Readmissions Reduction Program ({HRRP})},
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url = {https://www.cms.gov/medicare/payment/prospective-payment-systems/acute-inpatient-pps/hospital-readmissions-reduction-program-hrrp}
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}
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@article{charlson1987,
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author = {Charlson, M. E. and Pompei, P. and Ales, K. L. and MacKenzie, C. R.},
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title = {A new method of classifying prognostic comorbidity in longitudinal studies: development and validation},
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journal = {Journal of Chronic Diseases},
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year = {1987},
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volume = {40},
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number = {5},
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pages = {373--383}
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}
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@article{elixhauser1998,
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author = {Elixhauser, A. and Steiner, C. and Harris, D. R. and Coffey, R. M.},
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title = {Comorbidity measures for use with administrative data},
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journal = {Medical Care},
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year = {1998},
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volume = {36},
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number = {1},
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pages = {8--27}
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}
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@article{deschepper2020,
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author = {Deschepper, Mathieu and Eeckloo, Kristof and Vogelaers, Dominique and Waegeman, Willem},
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title = {Using structured pathology data to predict hospital-wide mortality at admission},
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journal = {PLoS One},
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year = {2020},
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volume = {15},
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number = {6},
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pages = {e0235117}
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}
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@article{lelay2022,
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author = {Le Lay, Jonathan and Martin, Sylvain and Mosnier, Arnaud and others},
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title = {Prediction of hospital readmission of multimorbid patients using machine learning models},
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journal = {PLoS One},
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year = {2022},
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volume = {17},
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number = {12},
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pages = {e0279433}
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}
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@article{qiao2022,
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author = {Qiao, Edmund M. and Deng, Jie and Kluger, Harvey M. and Yu, James B. and Gross, Cary P.},
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title = {Evaluating High-Dimensional Machine Learning Models to Predict Hospital Mortality Among Older Patients With Cancer},
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journal = {JCO Clinical Cancer Informatics},
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year = {2022},
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volume = {6},
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pages = {e2100186}
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}
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@article{davis2022,
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author = {Davis, Steve and Borah, Michael F. and Hansen, Justin and Malin, Bradley and Robinson, Jonathan and Turchin, Alexander},
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title = {Effective hospital readmission prediction models using machine-learned features},
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journal = {BMC Health Services Research},
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year = {2022},
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volume = {22},
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number = {1},
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pages = {1415}
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}
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@article{harerimana2021,
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author = {Harerimana, Gaspard and Kim, Jong Wook and Jang, Beakcheol},
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title = {A deep attention model to forecast the Length Of Stay and the in-hospital mortality right on admission from {ICD} codes and demographic data},
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journal = {Journal of Biomedical Informatics},
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year = {2021},
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volume = {118},
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pages = {103778}
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}
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@article{matsui2022,
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author = {Matsui, Hiroki and Yasunaga, Hideo and Fushimi, Kiyohide and Homma, Yuichi},
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title = {Development of Deep Learning Models for Predicting In-Hospital Mortality Using an Administrative Claims Database: Retrospective Cohort Study},
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journal = {JMIR Medical Informatics},
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year = {2022},
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volume = {10},
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number = {2},
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pages = {e27936}
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}
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@article{nguyen2017,
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author = {Nguyen, Phuoc and Tran, Truyen and Wickramasinghe, Nilmini and Venkatesh, Svetha},
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title = {{Deepr}: A Convolutional Net for Medical Records},
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journal = {IEEE Journal of Biomedical and Health Informatics},
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year = {2017},
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volume = {21},
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number = {1},
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pages = {22--30}
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}
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@misc{ahrq_elixhauser,
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author = {{Agency for Healthcare Research and Quality}},
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title = {Elixhauser Comorbidity Software Refined for {ICD-10-CM}},
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url = {https://www.hcup-us.ahrq.gov/toolssoftware/comorbidityicd10/comorbidity_icd10.jsp}
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}
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@article{fernando2019,
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author = {Fernando, Dulith T. and Berecki-Gisolf, Janneke and Newstead, Stuart and Ansari, Zul},
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title = {Effect of comorbidity on injury outcomes: a review of existing indices},
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journal = {Annals of Epidemiology},
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year = {2019},
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volume = {36},
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pages = {5--14}
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}
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@article{quan2005,
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author = {Quan, Hude and Sundararajan, Vijaya and Halfon, Patricia and others},
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title = {Coding algorithms for defining comorbidities in {ICD-9-CM} and {ICD-10} administrative data},
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journal = {Medical Care},
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year = {2005},
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volume = {43},
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number = {11},
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pages = {1130--1139}
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}
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@article{deyo1992,
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author = {Deyo, Richard A. and Cherkin, Daniel C. and Ciol, Marcia A.},
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title = {Adapting a clinical comorbidity index for use with {ICD-9-CM} administrative databases},
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journal = {Journal of Clinical Epidemiology},
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year = {1992},
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volume = {45},
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number = {6},
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pages = {613--619}
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}
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@article{quan2011,
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author = {Quan, Hude and Li, Bing and Couris, Chantal M. and others},
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title = {Updating and validating the {Charlson} comorbidity index and score for risk adjustment in hospital discharge abstracts using data from 6 countries},
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journal = {American Journal of Epidemiology},
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year = {2011},
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volume = {173},
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number = {6},
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pages = {676--682}
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}
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@misc{stagg2006,
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author = {Stagg, Vince},
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title = {{CHARLSON}: {Stata} module to calculate {Charlson} index of comorbidity},
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year = {2006},
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publisher = {Boston College Department of Economics}
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}
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@inproceedings{zaheer2017,
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author = {Zaheer, Manzil and Kottur, Satwik and Ravanbakhsh, Siamak and Poczos, Barnabas and Salakhutdinov, Ruslan and Smola, Alexander},
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title = {Deep Sets},
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booktitle = {Advances in Neural Information Processing Systems},
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year = {2017},
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volume = {30}
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}
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@inproceedings{abadi2016,
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author = {Abadi, Mart{\'i}n and Barham, Paul and Chen, Jianmin and others},
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title = {{TensorFlow}: A System for Large-Scale Machine Learning},
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booktitle = {Proceedings of the 12th {USENIX} Symposium on Operating Systems Design and Implementation},
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year = {2016},
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pages = {265--283}
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}
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@article{youden1950,
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author = {Youden, W. J.},
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title = {Index for rating diagnostic tests},
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journal = {Cancer},
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year = {1950},
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volume = {3},
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number = {1},
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pages = {32--35}
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}
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@article{delong1988,
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author = {DeLong, Elizabeth R. and DeLong, David M. and Clarke-Pearson, Daniel L.},
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title = {Comparing the areas under two or more correlated receiver operating characteristic curves: a nonparametric approach},
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journal = {Biometrics},
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year = {1988},
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volume = {44},
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number = {3},
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pages = {837--845}
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}
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@inproceedings{sundararajan2017,
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author = {Sundararajan, Mukund and Taly, Ankur and Yan, Qiqi},
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title = {Axiomatic Attribution for Deep Networks},
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booktitle = {Proceedings of the 34th International Conference on Machine Learning},
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year = {2017},
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pages = {3319--3328}
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}
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@article{joynt2013,
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author = {Joynt, Karen E. and Jha, Ashish K.},
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title = {Characteristics of hospitals receiving penalties under the {Hospital Readmissions Reduction Program}},
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journal = {JAMA},
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year = {2013},
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volume = {309},
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number = {4},
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pages = {342--343}
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}
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@article{desai2016,
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author = {Desai, Nihar R. and Ross, Joseph S. and Kwon, Jin Yul and others},
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title = {Association Between Hospital Penalty Status Under the {Hospital Readmission Reduction Program} and Readmission Rates for Target and Nontarget Conditions},
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journal = {JAMA},
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year = {2016},
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volume = {316},
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number = {24},
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pages = {2647--2656}
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}
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@article{zuckerman2017,
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author = {Zuckerman, Rachael B. and Sheingold, Steven H. and Orav, E. John and Ruhter, Jordan and Epstein, Arnold M.},
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title = {Effect of a Hospital-wide Measure on the Readmissions Reduction Program},
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journal = {New England Journal of Medicine},
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year = {2017},
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volume = {377},
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number = {16},
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pages = {1551--1558}
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}
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@article{obermeyer2019,
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author = {Obermeyer, Ziad and Powers, Brian and Vogeli, Christine and Mullainathan, Sendhil},
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title = {Dissecting racial bias in an algorithm used to manage the health of populations},
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journal = {Science},
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year = {2019},
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volume = {366},
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number = {6464},
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pages = {447--453}
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}
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@article{kind2014,
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author = {Kind, Amy J. H. and Jencks, Stephen and Brock, Jim and others},
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title = {Neighborhood socioeconomic disadvantage and 30-day rehospitalization: a retrospective cohort study},
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journal = {Annals of Internal Medicine},
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year = {2014},
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volume = {161},
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number = {11},
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pages = {765--774}
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}
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@article{joynt2011,
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author = {Joynt, Karen E. and Orav, E. John and Jha, Ashish K.},
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title = {Thirty-day readmission rates for {Medicare} beneficiaries by race and site of care},
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journal = {JAMA},
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year = {2011},
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volume = {305},
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number = {7},
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pages = {675--681}
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}
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@article{hansen2011,
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author = {Hansen, Luke O. and Young, Robert S. and Hinami, Keiki and Leung, Albert and Williams, Mark V.},
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title = {Interventions to reduce 30-day rehospitalization: a systematic review},
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journal = {Annals of Internal Medicine},
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year = {2011},
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volume = {155},
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number = {8},
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pages = {520--528}
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}
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@article{coleman2006,
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author = {Coleman, Eric A. and Parry, Carla and Chalmers, Sandra and Min, Sung-joon},
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title = {The care transitions intervention: results of a randomized controlled trial},
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journal = {Archives of Internal Medicine},
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year = {2006},
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volume = {166},
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number = {17},
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pages = {1822--1828}
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}
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@article{rudin2019,
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author = {Rudin, Cynthia},
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title = {Stop Explaining Black Box Machine Learning Models for High Stakes Decisions and Use Interpretable Models Instead},
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journal = {Nature Machine Intelligence},
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year = {2019},
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volume = {1},
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number = {5},
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pages = {206--215}
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}
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1044
sample_music.svg
1044
sample_music.svg
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Load Diff
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Before Width: | Height: | Size: 71 KiB |
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@ -83,6 +83,16 @@
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Shows the .csl-entry from the bibliography in-page.
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============================================================ */
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.popup-citation-entry {
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display: block;
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}
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.popup-citation-entry + .popup-citation-entry {
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margin-top: 0.55rem;
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padding-top: 0.55rem;
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border-top: 1px solid var(--border);
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}
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.popup-citation .csl-entry {
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font-family: var(--font-sans);
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font-size: 0.8rem;
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@ -99,9 +109,16 @@
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word-break: break-all;
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}
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/* Hide the [N] number badge — already shown in the inline marker */
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.popup-citation .ref-num {
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display: none;
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font-weight: 600;
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color: var(--text-faint);
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margin-right: 0.35em;
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font-variant-numeric: tabular-nums;
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text-decoration: none;
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}
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.popup-citation .ref-num:hover {
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color: var(--text);
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}
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/* Epistemic preview popup — content cloned from #epistemic; ep-* styles inherited */
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@ -203,13 +203,20 @@
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);
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}
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/* 1. Citations — synchronous DOM lookup */
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/* 1. Citations — synchronous DOM lookup; supports multi-citation groups
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via data-cite-keys (space-separated list of ref-* IDs). */
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function citationContent(target) {
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return new Promise(function (resolve) {
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var id = (target.getAttribute('href') || '').slice(1);
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var keysAttr = target.getAttribute('data-cite-keys');
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var ids = keysAttr
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? keysAttr.trim().split(/\s+/)
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: [(target.getAttribute('href') || '').slice(1)];
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var parts = ids.map(function (id) {
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var entry = document.getElementById(id);
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resolve(entry
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? '<div class="popup-citation">' + entry.innerHTML + '</div>'
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return entry ? '<div class="popup-citation-entry">' + entry.innerHTML + '</div>' : null;
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}).filter(Boolean);
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resolve(parts.length
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? '<div class="popup-citation">' + parts.join('') + '</div>'
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: null);
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});
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}
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@ -28,9 +28,6 @@ $if(search)$
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<link rel="stylesheet" href="/pagefind/pagefind-ui.css">
|
||||
$endif$
|
||||
<script src="/js/theme.js"></script>
|
||||
$if(has-citations)$
|
||||
<script src="/js/citations.js" defer></script>
|
||||
$endif$
|
||||
$if(viz)$
|
||||
<link rel="stylesheet" href="/css/viz.css">
|
||||
<script src="https://cdn.jsdelivr.net/npm/vega@5" defer></script>
|
||||
|
|
|
|||
Loading…
Reference in New Issue